p3-get-genome-sp-genes¶
Return Specialty Genes of the Specified Type in One or More Genomes¶
p3-get-genome-sp-genes.pl [options] property
This script returns specialty gene data for the genes in one of more genomes. The script recognizes the following types of specialty genes.
amr
Antibiotic Resistance
human
Human Homolog
target
Drug Target
transporter
Transporter
Parameters¶
The positional parameter is the type of specialty gene desired.
The standard input can be overridden using the options in Input Options.
Additional command-line options are those given in Data Options and Column Options plus the following.
fields
List the available field names.
typeNames
List the available specialty gene types.
##TODO additional options